projects
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projects [2011/09/11 01:18] – dymond | projects [2015/08/11 20:45] – jarek | ||
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- | ====== | + | ====== |
- | (Listed in order received.) | + | \\ |
- | ====== Building an autonomous motorboat ====== | + | ===Data visualization in Skydive=== |
- | **Supervisor**: Michael Jenkin | + | **Supervisor: Jarek Gryz** |
- | **Required Background**: General CSE408x prerequisites | + | Skydive is a prototype system designed for database visualization using a concept of the socalled |
+ | data pyramid. The system is composed of three modules (DB - Database Module, D2I - | ||
+ | Data-to-Image module, and VC - Visualizaton Client). Each is designed to use a different type | ||
+ | of computer memory. The DB module uses disk to store and manage the raw data, and materialized | ||
+ | data pyramids. The D2I module works with a small subset of the aggregated dataset, | ||
+ | and stores data in main memory (RAM). The VC module uses the graphic card’s capabilities to | ||
+ | perform more advanced operations – such as zooming, scaling, panning, and rotation – over the | ||
+ | graphical representation of the data. | ||
+ | Currently the system support three presentation models implemented within the Visualization | ||
+ | Component, namely: | ||
+ | • a 2D heat-map; | ||
+ | • a 2.5 D heat-map by 3D barchart; and | ||
+ | • a 2.5 D terrain (by mesh and UV-mapping). | ||
- | **Recommended Background**: Robotics | + | The goal of the project is to implement two additional ways of data visualization as well as |
+ | extend some of existing ones, that is: | ||
- | __Description__ | + | 1. Implement |
- | An opportunity exists for a small number of students to build an autonomous motorboat using a RC motorboat as a base and integrating computation and control in the form of a Beagleboard. Students will participate in lectures | + | |
+ | 2. Implement functions for visualization based on cross-product of data pyramids. | ||
+ | 3. Add support for specular and normal maps for 2.5 D terrain presentation model. | ||
- | ---- | + | Background Requirements |
- | : | + | • Java programming course |
- | ---- | + | |
- | ====== Athenians Data Project ====== | + | \\ |
+ | ===Genome-wide identification of plant micro RNAs=== | ||
- | **Supervisor**: | ||
- | **Required Background**: General CSE408x prerequisites | + | **Supervisor: Katalin Hudak** |
- | **Recommended Background**: | ||
- | __Description__ | + | The Hudak Lab in the Biology Department has an opening for a fourth-year Honours student to assist with a bioinformatics |
- | The Athenians Project is a multi-year, ongoing | + | |
- | Possible project ideas for this term span from simpler ones such as | + | |
- | how to present data in the best possible way, add spatial characteristics to existing data, | + | |
- | add multimedia data, improve text searching, etc. to more complex ideas such as filling | + | |
- | missing parts for the " | + | |
- | words has been done in the past using expert | + | |
- | certain rules/ | + | |
- | when talking in IT terminology. Furthermore, | + | |
- | the database with some likelihood. Associating probabilities with hypotheses introduces | + | |
- | another opportunity for research projects. | + | |
- | ---- | + | |
- | : | + | |
- | ---- | + | |
- | ====== Three-Dimensional Context from Linear Perspective for Video Surveillance Systems ====== | + | Working with the support of a PhD student, your project will involve: |
- | **Supervisor**: | + | 1) Prediction of micro RNA (miRNA) targets on the basis of complementary sequence matches |
- | **Requirements**: | + | 2) Correlation of miRNA and mRNA expression changes to identify genes that are regulated by miRNAs |
- | __Description__ | + | 3) Conducting pathway analysis to determine which biological processes are controlled by miRNAs |
- | To provide visual surveillance over a large environment, | + | 4) Construction of a miRNA/ |
+ | This work will contribute to a scientific manuscript | ||
- | This problem can be addressed by automatically pre-mapping two-dimensional surveillance video data into three-dimensional coordinates. | + | Requirements: |
- | Mapping surveillance video to three-dimensional coordinates requires construction of a virtual model of the three-dimensional scene. | + | 1) Pre-requisites as per EECS Calendar |
- | This project will investigate a monocular method for inferring three-dimensional context for video surveillance. | + | 2) Facility |
- | Although the Manhattan world assumption provides powerful constraints, | + | 3) Preference for students with knowledge |
- | The student will work closely with graduate students and postdoctoral fellows at York University, as well as researchers at other institutions involved | + | 4) Able to begin in September 2015 |
- | For more information on the laboratory: [[http:// | + | Learning outcomes: |
- | ---- | + | 1) Manipulate and analyze quantitative biological data |
- | : | + | |
- | ---- | + | |
- | ====== Estimating Pedestrian | + | 2) Develop |
- | **Supervisor**: | + | 3) Manage a CentOS computer server to store and facilitate ongoing research |
- | **Requirements**: | + | No knowledge of biology is required. |
- | __Description__ | + | For more information, |
+ | Hudak Lab website- http:// | ||
- | Facilities planning at both city (e.g., Toronto) and institutional (e.g., York University) scales requires accurate data on the flow of people and vehicles throughout the environment. | + | RNA sequencing- http://www.illumina.com/ |
- | The density of permanent urban video surveillance camera installations has increased dramatically over the last several years. | + | miRNAs- http:// |
- | This project will explore the use of computer vision algorithms for the automatic estimation of pedestrian and vehicle flows from video surveillance data. The ultimate goal is to provide planners with accurate, continuous, up-to-date information on facility usage to help guide planning. | + | \\ |
- | The student will work closely with graduate students and postdoctoral fellows at York University, as well as researchers at other institutions involved in the project. | ||
- | For more information on the laboratory: [[http:// | + | ===Dynamic Interface Detection and Control Project=== |
- | + | ||
- | ---- | + | |
- | : | + | |
- | ---- | + | |
- | ====== Tandem repeat detection using spectral methods ====== | + | **Supervisor: |
- | **Supervisor**: | ||
- | **Required Background**: | + | Contrary to most industries, fine chemical manufacturing is dominated by batch production methods. Increasing economic, environmental and safety pressures are motivating a turn towards continuous synthesis. Rather than making products |
- | **Recommended Background**: | + | Extraction of the reaction mixture for purification and/or further processing is an important step in chemical manufacturing. This is a relatively straightforward operation in batch production, |
- | __Description__ | + | A key step in the process takes place in a clear tube that is mounted vertically. The tube contains |
- | DNA sequences of organisms have many repeated substrings. These are called repeats | + | |
- | Finding tandem repeats | + | One way of solving this problem |
- | The student will implement existing spectral algorithms based on Fourier Transforms and on an autoregressive model. He will then make changes suggested by the supervisor, and evaluate the effect | + | Specific goals of the project |
+ | - Develop a computer vision system that can detect and monitor the interface between two miscible fluids of different density. | ||
+ | - Evaluate the performance of the system over a range of different (and typical) fluids | ||
+ | - Explore the use of different illuminant/ | ||
- | ---- | + | The successful candidate(s) will have the experience of working with a diverse group of scientists and engineers toward the design and implementation of an automated liquid extraction device with applications across many industries. Upon successful prototyping, |
- | : | + | |
- | ---- | + | |
- | ====== Touch- and Gesture-based Text Entry With Automatic Error Correction ====== | + | For further information please contact, |
- | **Supervisor**: | + | Michael Jenkin (jenkin@cse.yorku.ca) or Michal Organ (organ@yorku.ca) |
- | **Required Background**: | + | \\ |
- | CSE3461 (or equivalent), | + | ====== DDoS Attack using Google-bots ====== |
- | A student wishing to do this project must be well versed in Java, Eclipse, and developing java code for the Android operating system. | + | |
+ | **Supervisor**: | ||
- | **Recommended Background**: | + | **Recommended Background**: |
- | Possession of an Android touch-based phone or tablet would be an asset, but is not essential. | + | |
- | __Description__ | + | Not long ago, botnets - networks of compromised computers - were seen as |
- | This project involves extending a touch-based text entry method to include automatic error correction. | + | the most effective (if not the only) means of conducting Distributed Denial |
+ | of Service (DDoS) attacks. However, with the growing popularity and prevalence | ||
+ | of application-layer over other types of DDoS attacks, the DDoS execution | ||
+ | landscape | ||
+ | new trend is the execution of application-layer DDoS attacks by means of | ||
+ | skillfully manipulated Web-crawlers, such as Google-bots. | ||
+ | The goal of this project | ||
+ | framework consisting | ||
+ | domain specially designed | ||
+ | into generating attack traffic towards | ||
+ | victim' | ||
+ | component, | ||
+ | estimation | ||
+ | to an actual (real-world) target/ | ||
- | ---- | ||
- | : | ||
- | ---- | ||
- | ====== Early Breast Cancer Detection based on MRI’s. ====== | ||
- | **Supervisor**: | + | \\ |
+ | ====== Attentive Sensing for Better Two-Way Communication in Remote Learning Environments ====== | ||
- | **Required Background**: General CSE408x prerequisites | + | **Supervisor**: James Elder |
- | **Recommended background**: Signal processing, i.e. CSE3451 | + | **Required Background**: General CSE408x prerequisites, good programming skills, |
+ | good math skills, knowledge of C and MATLAB programming languages | ||
- | Project Description: | + | One of the challenges in remote learning is to allow students to communicate effectively with the lecturer. For example, when a student asks a question, communication will be more effective if the instructor has a zoomed view of the student’s face, so that s/he can interpret expressions etc. |
- | processing techniques for early detection | + | |
- | modalities. In particular, we propose to develop time reversal beamforming imager, | + | The goal of this project is to apply attentive sensing technology (www.elderlab.yorku.ca) |
- | based on our earlier work in time reversal signal processing, for detecting early stage | + | |
- | breast cancer tumours from MRI data. | + | In particular, working |
- | Our preliminary work has illustrated the type of | + | |
- | results that are possible for breast cancer detection by applying time reversal signal | + | - Study the problem of detecting hand-raises in the preattentive sensor stream |
- | processing on MRI breast data. In this research, we propose | + | - Implement |
- | provide a quantitative understanding of the practical gains provided by time reversal | + | - Evaluate these algorithms in a real-classroom setting, using proprietary attentive sensing technology |
- | in MRI based breast cancer detection and its limitations. This will be accomplished | + | |
- | a local hospital, | + | |
- | important | + | |
- | estimated locations of the tumours (as derived | + | |
- | locations as identified by the pathologists. The second step will quantify | + | |
- | of our estimation | + | |
- | ---- | ||
- | : | ||
- | ---- | ||
- | ====== Developing Fast Speech Recognition Engine using GPU ====== | ||
- | **Supervisor**: | + | ====== Attentive Sensing for Sport Video Recording Markets ====== |
- | **Required Background**: | + | **Supervisor**: James Elder |
- | General prerequisites | + | |
+ | **Required Background**: | ||
- | __Description__ | + | |
- | + | The goal of this project is to modify York University’s patented attentive sensor technology | |
- | Recently, Graphics Processing Units (GPU' | + | |
- | + | The general problem is to use attentive sensing technology (www.elderlab.yorku.ca) to visually detect and track multiple moving agents (e.g., skiers, riders, horses) and to select specific agents for active high-resolution smooth pursuit. | |
- | During the recent years, there is an increasing demand in the job market | + | |
- | + | The student | |
- | References | + | |
- | + | 1. Ground-truth available datasets | |
- | [1] Kisun You, Jike Chong, Youngmin Yi, Gonina, E., Hughes, C.J., Yen-Kuang Chen, Wonyong Sung, Keutzer, K., " | + | 2. Evaluate current attentive algorithms |
- | + | 3. Modify these algorithms to improve performance on these datasets | |
- | [2] Jike Chong, Ekaterina Gonina, Youngmin Yi, Kurt Keutzer, "A Fully Data Parallel WFST-based Large Vocabulary Continuous Speech Recognition on a Graphics Processing Unit," Proc. of Interspeech 2009, Brigton, UK, 2009. | + | |
- | ---- | + | ------------ |
- | : | + | |
- | ---- | + | |
- | ====== Solving Polynomials ====== | + | |
- | + | ||
- | **Supervisor**: | + | |
- | + | ||
- | **Required Background**: | + | |
- | General prerequisites plus course in Numerical Methods, and knowledge of programming, | + | |
- | + | ||
- | + | ||
- | __Description__ | + | |
- | + | ||
- | In this project you will compare several efficient methods for solving polynomials. | + | |
- | ---- | + | |
- | : | + | |
- | ---- | + | |
- | ====== MF7114 Assembler ====== | + | |
- | + | ||
- | **Supervisor**: | + | |
- | + | ||
- | **Required Background**: | + | |
- | Some knowledge of microprocessor architecture and assembly programming | + | |
- | + | ||
- | __Description__ | + | |
- | + | ||
- | Every microprocessor is supported by a variety of software tools, such as assemblers, disassemblers, and debuggers | + | |
- | + | ||
- | Background Information: | + | |
- | manufactured in Canada (by Microsystems International Ltd, or MIL) and one of the earliest microprocessors ever produced. The microprocessor was used, among other applications as the CPU of the CPS-1 microcomputer. Although none of the CPS/1 computers (nor MF7114 software) have survived, technical information about the microprocessor and the CPS-1 has been preserved. This makes the design and | + | |
- | implementation of an assembler possible. More information | + | |
- | + | ||
- | http://www.cse.yorku.ca/ | + | |
- | + | ||
- | ---- | + | |
- | : | + | |
- | ---- | + | |
- | ====== MF7114 Debugger ====== | + | |
- | + | ||
- | **Supervisor**: | + | |
- | + | ||
- | **Required Background**: | + | |
- | Some knowledge of microprocessor architecture and assembly programming | + | |
- | __Description__ | + | \\ |
+ | ====== Hunting for Bugs in Logging: applying JPF to log4j ====== | ||
- | Every microprocessor is supported by a variety of software tools, such as assemblers, | + | **Supervisor: |
- | Background Information: The MF7114 CPU was the first microprocessor designed and | + | Description: |
- | manufactured in Canada | + | Java PathFinder |
- | implementation | + | The Java library Apache log4j allows developers to control which log |
+ | statements are output. | ||
+ | to detect bugs in log4j by means of JPF with very limited succes. | ||
- | http://www.cse.yorku.ca/ | + | Recently, in collaboration with Shafiei (NASA) we have developed |
+ | an extension of JPF called jpf-nhandler. The aim of this project | ||
+ | is to apply this extension to log4j. | ||
- | ---- | + | [1] David A. Dickey, B. Sinem Dorter, J. Michael German, Benjamin D. Madore, Mark W. Piper, Gabriel L. Zenarosa. " |
- | : | + | |
- | ---- | + | |
- | ======Web Crawlers Behaving Like Humans: Are We There Yet!? ====== | + | **Required Background:** General CSE408x prerequisites |
+ | \\ | ||
+ | ------------ | ||
+ | \\ | ||
- | **Supervisor**: | ||
- | **Required Background**: | ||
- | __Description__ | ||
- | Distributed Denial of Service (DDoS) attacks are recognized as one | + | ====== Mining Software Repositories Data====== |
- | of the most serious threats to today' | + | |
- | simplicity of their execution and their ability to severely degrade | + | |
- | the quality at which Web-based services are offered to the end users. | + | |
- | An especially challenging form of DDoS attacks are the so-called | + | |
- | Application-Layer DDoS attacks. Namely: | + | |
- | 1) In Application-Layer DDoS attacks, the attackers utilize a flood | + | |
- | of legitimate-looking Layer-7 network sessions (i.e., sessions that | + | |
- | are generally hard to detect and/or filter out by a firewall or an | + | |
- | IDS system); | + | |
- | 2) Increasingly, | + | |
- | cleverly programmed crawler that executes a semi-random walk over the | + | |
- | web site links, thereby attempting to appear as a legitimate human | + | |
- | visitor. | + | |
- | The goal of this project is to investigate the state of the art in | + | **Supervisor:** Zhen Ming (Jack) Jiang (zmjiang at cse dot yorku dot ca) |
- | malicious web crawler design. In particular, the project will look | + | |
- | into the challenges of designing a smart-DDoS-crawler from the | + | |
- | attacker point of view - one of these challenges being the estimation | + | |
- | of web-page popularity assuming no a priori access to the web-logs | + | |
- | of the victim web-site. | + | |
- | ---- | + | |
- | : | + | |
- | ---- | + | |
- | ====== GFI Sandbox | + | |
- | **Supervisor**: Natalija Vlajic | + | **Required Background:** Good programming skills in Java; Good analytical and communication skills; Knowledge in AI and statistics; Interested in large scale software analysis |
- | **Required Background**: General prerequisites. | + | **Short Description: |
+ | \\ | ||
+ | ------------------ | ||
+ | \\ | ||
- | __Description__ | ||
- | GFI Sandbox is a sophisticated industry-leading tool for quick and | ||
- | safe analysis of malware behaviour. The goals of this project are: | ||
- | 1) familiarize yourself with the operation of GFI Sandbox; | ||
- | 2) using readily available GFI Sandbox Feeds (i.e., ThreatTrack Feeds), | ||
- | build a database of malware designed specifically for execution of | ||
- | DDoS-attacks - the so-called botnet malware; | ||
- | 3) examine the behaviour of the collected malware 'upon execution'; | ||
- | 4) propose and build an environment - comprising the standard freeware | ||
- | security tools - for longer term (beyond immediate execution) analysis | ||
- | of the collected malware. | ||
+ | ======Model-based Design and Development of Embedded Systems with Code Generation Tools====== | ||
- | ---- | + | **Supervisor:** Jia Xu |
- | : | + | |
- | ---- | + | |
- | Network analysis of EEG data: Understanding connections | + | **Required Background:** At least a B+ in Embedded Systems (CSE3215), MATLAB, C programming skills, solid experience in using a microcontroller |
+ | such as Arduino. | ||
- | ====== Network analysis of EEG data: Understanding connections in the brain ====== | + | **Project Description:** |
- | **Supervisor**: | + | Model-based design with code generation tools can be used for simulation, rapid prototyping, |
- | **Required Background**: | + | \\ |
+ | ------------------ | ||
+ | \\ | ||
- | **Preferred**: | + | ======C2000 Concerto Microcontrollers====== |
+ | **Supervisor: | ||
- | __Description__ | + | **Required Background: |
- | Electroencephalogram | + | strong C programming skills, solid knowledge |
- | The tools that are used to analyze communication networks can also be used to analyze brain networks. In this interdisciplinary project, you will work with a collection of EEG data to identify correlated measurements, | + | **Description: |
+ | two cores on a single-chip | ||
+ | real-time control with faster/more loops and small sampling window; | ||
+ | and an ARM 32-bit Cortex-M3 host core for communications and general purpose. The selected student | ||
+ | C2000 Concerto family of microcontrollers through testing | ||
+ | that runs on C2000 Concerto Microcontrollers. | ||
+ | \\ | ||
+ | ------------------ | ||
+ | \\ | ||
- | ---- | + | ======Real-Time Bidding Platform====== |
- | : | + | |
- | ---- | + | |
- | ====== An Open Source Structural Equation Modeling Path Diagram to Syntax Application ====== | + | **Supervisor: |
- | **Supervisor**: Jeff Edmonds | + | **Required Background:** At least a B+ in Operating System Fundamentals |
+ | (CSE3221), strong Ubuntu/ | ||
- | **Required Background**: JAVA | + | **Description: |
- | **Recommended Background**: | + | \\ |
+ | ------------------ | ||
+ | \\ | ||
- | __Description__ | + | ======Circuit |
- | The software required is an application that allows researchers to define their hypothesized models visually | + | |
- | To date a promising functional application has been developed in JAVA by a Computer Science student as a 4080 project. | + | **Supervisor: |
- | This a cross-disciplinary | + | **Description: |
+ | **Required Background** A background in undergraduate-level electronics is very important. | ||
- | ---- | + | \\ |
- | : | + | ------------------ |
- | ---- | + | \\ |
+ | More project proposals may be added here in the first week of the winter term. | ||
+ | \\ | ||
+ | ------------------ | ||
+ | \\ | ||
+ | \\ |
projects.txt · Last modified: 2016/01/13 20:05 by stevenc